PyMood Setup Project from Data File Data File Import

To import the .rgb data file into your Project from Data File window
Click on 'Open RGB file' button > select the data file > Click Open

The data file will be loaded into the white frame of the Project from Data File window. If you would like to load the annotation data (everything after the first space in the FASTA headers of your sequence files) click the top 'Select' button to load the Query annotation, select the .annotation file corresponding to your query database, and click Open.
Repeat this procedure for target databases.

Make sure that the .annotation files' colors are identical to the colors of the corresponding .matrix files. For example, the genome of Lactococcus lactis (the query database) was analyzed versus the genomes of Bacillus subtilis, Escherichia coli, and Pseudomonas aeruginosa, and the L_lacti_vs_B_subt.blastp.matrix file was imported into the red portion of the Data File Setup window, the red annotation file will be B_subt.annotation.